Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.63■□□□□ 0.89
Cchcr1Q8K2I2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cchcr1Q8K2I2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Gm12896-201ENSMUST00000118430 226 ntBASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cchcr1Q8K2I2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cchcr1Q8K2I2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cchcr1Q8K2I2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Gm11249-201ENSMUST00000117071 859 ntBASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms