Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Gm8969-201ENSMUST00000199694 526 ntBASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Gm43183-201ENSMUST00000200632 547 ntBASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd3Q8CIK8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Gm10812-201ENSMUST00000099864 546 ntBASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Rfwd3Q8CIK8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Gm29791-202ENSMUST00000207888 369 ntBASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.36■□□□□ 0.21
Rfwd3Q8CIK8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfwd3Q8CIK8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms