Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Gm18666-201ENSMUST00000190039 958 ntBASIC17.53■□□□□ 0.4
Clip4Q8CI96 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.53■□□□□ 0.4
Clip4Q8CI96 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.53■□□□□ 0.4
Clip4Q8CI96 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Zfp783-201ENSMUST00000095946 670 ntBASIC17.53■□□□□ 0.4
Clip4Q8CI96 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Tgds-204ENSMUST00000228543 1594 ntBASIC17.53■□□□□ 0.4
Clip4Q8CI96 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clip4Q8CI96 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Gm13158-201ENSMUST00000122007 736 ntBASIC17.52■□□□□ 0.4
Clip4Q8CI96 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clip4Q8CI96 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Clip4Q8CI96 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Clip4Q8CI96 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clip4Q8CI96 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.52■□□□□ 0.39
Clip4Q8CI96 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clip4Q8CI96 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clip4Q8CI96 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.49■□□□□ 0.39
Clip4Q8CI96 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Gm38285-201ENSMUST00000192928 922 ntBASIC17.49■□□□□ 0.39
Clip4Q8CI96 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Gm10812-201ENSMUST00000099864 546 ntBASIC17.49■□□□□ 0.39
Clip4Q8CI96 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms