Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Smc5Q8CG46 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Smc5Q8CG46 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc5Q8CG46 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc5Q8CG46 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smc5Q8CG46 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smc5Q8CG46 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smc5Q8CG46 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smc5Q8CG46 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smc5Q8CG46 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.57■■□□□ 1.04
Smc5Q8CG46 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Gm37166-201ENSMUST00000195473 2474 ntBASIC21.57■■□□□ 1.04
Smc5Q8CG46 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc5Q8CG46 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.56■■□□□ 1.04
Smc5Q8CG46 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.56■■□□□ 1.04
Smc5Q8CG46 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Smc5Q8CG46 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc5Q8CG46 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.55■■□□□ 1.04
Smc5Q8CG46 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Smc5Q8CG46 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.54■■□□□ 1.04
Smc5Q8CG46 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.54■■□□□ 1.04
Smc5Q8CG46 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.54■■□□□ 1.04
Smc5Q8CG46 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smc5Q8CG46 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Mir5133-201ENSMUST00000174955 77 ntBASIC21.53■■□□□ 1.04
Smc5Q8CG46 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc5Q8CG46 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc5Q8CG46 Gm8839-201ENSMUST00000121279 1645 ntBASIC21.52■■□□□ 1.04
Smc5Q8CG46 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc5Q8CG46 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc5Q8CG46 Gm10138-203ENSMUST00000206952 366 ntBASIC21.52■■□□□ 1.04
Smc5Q8CG46 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Smc5Q8CG46 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms