Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.36■□□□□ 0.85
Alx1Q8C8B0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx1Q8C8B0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Gm6433-201ENSMUST00000118634 875 ntBASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx1Q8C8B0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Alx1Q8C8B0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.33■□□□□ 0.85
Alx1Q8C8B0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Alx1Q8C8B0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Alx1Q8C8B0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Alx1Q8C8B0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Alx1Q8C8B0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Alx1Q8C8B0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Alx1Q8C8B0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Alx1Q8C8B0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alx1Q8C8B0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Alx1Q8C8B0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Alx1Q8C8B0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alx1Q8C8B0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Alx1Q8C8B0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Alx1Q8C8B0 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.31■□□□□ 0.84
Alx1Q8C8B0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alx1Q8C8B0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alx1Q8C8B0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms