Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Uba3Q8C878 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Uba3Q8C878 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Uba3Q8C878 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Uba3Q8C878 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Uba3Q8C878 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Uba3Q8C878 Gm12085-201ENSMUST00000119263 940 ntBASIC18.35■□□□□ 0.53
Uba3Q8C878 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.35■□□□□ 0.53
Uba3Q8C878 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Uba3Q8C878 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Uba3Q8C878 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Uba3Q8C878 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Uba3Q8C878 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Uba3Q8C878 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Uba3Q8C878 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.34■□□□□ 0.53
Uba3Q8C878 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Uba3Q8C878 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.34■□□□□ 0.53
Uba3Q8C878 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.34■□□□□ 0.53
Uba3Q8C878 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Uba3Q8C878 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.34■□□□□ 0.53
Uba3Q8C878 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.34■□□□□ 0.53
Uba3Q8C878 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Uba3Q8C878 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Uba3Q8C878 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Uba3Q8C878 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Uba3Q8C878 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Uba3Q8C878 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Uba3Q8C878 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Uba3Q8C878 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Uba3Q8C878 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Uba3Q8C878 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Uba3Q8C878 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Uba3Q8C878 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.33■□□□□ 0.52
Uba3Q8C878 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Uba3Q8C878 Gm10252-201ENSMUST00000209541 832 ntBASIC18.33■□□□□ 0.52
Uba3Q8C878 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Uba3Q8C878 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Uba3Q8C878 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Uba3Q8C878 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.33■□□□□ 0.52
Uba3Q8C878 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Uba3Q8C878 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.33■□□□□ 0.52
Uba3Q8C878 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Uba3Q8C878 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.32■□□□□ 0.52
Uba3Q8C878 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Uba3Q8C878 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Uba3Q8C878 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.31■□□□□ 0.52
Uba3Q8C878 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.31■□□□□ 0.52
Uba3Q8C878 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.31■□□□□ 0.52
Uba3Q8C878 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Uba3Q8C878 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.31■□□□□ 0.52
Uba3Q8C878 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Uba3Q8C878 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms