Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps9d1Q8C190 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps9d1Q8C190 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.33■□□□□ 0.2
Vps9d1Q8C190 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps9d1Q8C190 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Mir5133-201ENSMUST00000174955 77 ntBASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps9d1Q8C190 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Gm6365-201ENSMUST00000054711 744 ntBASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vps9d1Q8C190 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps9d1Q8C190 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.29■□□□□ 0.2
Vps9d1Q8C190 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps9d1Q8C190 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms