Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp40Q8BWR4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp40Q8BWR4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp40Q8BWR4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp40Q8BWR4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Usp40Q8BWR4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp40Q8BWR4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp40Q8BWR4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC23.94■■□□□ 1.42
Usp40Q8BWR4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp40Q8BWR4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp40Q8BWR4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp40Q8BWR4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp40Q8BWR4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp40Q8BWR4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC23.93■■□□□ 1.42
Usp40Q8BWR4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Gm9013-201ENSMUST00000132939 882 ntBASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Usp40Q8BWR4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC23.92■■□□□ 1.42
Usp40Q8BWR4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Actl10-202ENSMUST00000226583 1501 ntBASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Gm7284-201ENSMUST00000131667 944 ntBASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Gm26039-201ENSMUST00000158152 144 ntBASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Gm29518-201ENSMUST00000190858 372 ntBASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.91■■□□□ 1.42
Usp40Q8BWR4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Usp40Q8BWR4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Usp40Q8BWR4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp40Q8BWR4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
Usp40Q8BWR4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp40Q8BWR4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp40Q8BWR4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp40Q8BWR4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 Gm14859-201ENSMUST00000117752 357 ntBASIC23.89■■□□□ 1.41
Usp40Q8BWR4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC23.89■■□□□ 1.41
Usp40Q8BWR4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Gm11355-201ENSMUST00000121120 306 ntBASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp40Q8BWR4 Gm5828-201ENSMUST00000071842 1860 ntBASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms