Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Cdk5rap1Q8BTW8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 Rarb-207ENSMUST00000225921 2756 ntBASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm45058-201ENSMUST00000205810 766 ntBASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cdk5rap1Q8BTW8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdk5rap1Q8BTW8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdk5rap1Q8BTW8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdk5rap1Q8BTW8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdk5rap1Q8BTW8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Cdk5rap1Q8BTW8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm9731-201ENSMUST00000209480 747 ntBASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm7791-201ENSMUST00000219066 539 ntBASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Grk6-206ENSMUST00000224995 2971 ntBASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdk5rap1Q8BTW8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap1Q8BTW8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Mir5130-201ENSMUST00000175160 84 ntBASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Mir8112-201ENSMUST00000184382 131 ntBASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap1Q8BTW8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms