Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lig4Q8BTF7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Gm27463-201ENSMUST00000183569 57 ntBASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.45■□□□□ 0.54
Lig4Q8BTF7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lig4Q8BTF7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Gm11539-201ENSMUST00000119837 557 ntBASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Gm13436-201ENSMUST00000120418 567 ntBASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lig4Q8BTF7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lig4Q8BTF7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lig4Q8BTF7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms