Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Suds3Q8BR65 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Gm11249-201ENSMUST00000117071 859 ntBASIC17.86■□□□□ 0.45
Suds3Q8BR65 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Dio3-201ENSMUST00000097228 1449 ntBASIC17.86■□□□□ 0.45
Suds3Q8BR65 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Suds3Q8BR65 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.85■□□□□ 0.45
Suds3Q8BR65 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Suds3Q8BR65 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.84■□□□□ 0.45
Suds3Q8BR65 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
Suds3Q8BR65 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Suds3Q8BR65 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.83■□□□□ 0.45
Suds3Q8BR65 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Suds3Q8BR65 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.83■□□□□ 0.45
Suds3Q8BR65 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Suds3Q8BR65 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Suds3Q8BR65 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Suds3Q8BR65 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Suds3Q8BR65 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Suds3Q8BR65 Zfp783-201ENSMUST00000095946 670 ntBASIC17.83■□□□□ 0.44
Suds3Q8BR65 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Suds3Q8BR65 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Suds3Q8BR65 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Suds3Q8BR65 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Suds3Q8BR65 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Suds3Q8BR65 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Suds3Q8BR65 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Gm38285-201ENSMUST00000192928 922 ntBASIC17.82■□□□□ 0.44
Suds3Q8BR65 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Suds3Q8BR65 Flg-201ENSMUST00000050758 1488 ntBASIC17.82■□□□□ 0.44
Suds3Q8BR65 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Suds3Q8BR65 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms