Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.9■□□□□ 0.3
Cpsf4Q8BQZ5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.89■□□□□ 0.3
Cpsf4Q8BQZ5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Cpsf4Q8BQZ5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4Q8BQZ5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4Q8BQZ5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4Q8BQZ5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Gm13158-201ENSMUST00000122007 736 ntBASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Gm10698-201ENSMUST00000182663 604 ntBASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms