Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp5Q8BKN5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp5Q8BKN5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp5Q8BKN5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.37■□□□□ 0.37
Tubgcp5Q8BKN5 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Gm37179-201ENSMUST00000194862 823 ntBASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp5Q8BKN5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp5Q8BKN5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp5Q8BKN5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp5Q8BKN5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp5Q8BKN5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp5Q8BKN5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp5Q8BKN5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp5Q8BKN5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.33■□□□□ 0.37
Tubgcp5Q8BKN5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.33■□□□□ 0.36
Tubgcp5Q8BKN5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp5Q8BKN5 Gm6211-202ENSMUST00000167849 925 ntBASIC17.33■□□□□ 0.36
Tubgcp5Q8BKN5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp5Q8BKN5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp5Q8BKN5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp5Q8BKN5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Gm12933-201ENSMUST00000120203 872 ntBASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.32■□□□□ 0.36
Tubgcp5Q8BKN5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms