Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Gm11249-201ENSMUST00000117071 859 ntBASIC20.42■□□□□ 0.86
Samm50Q8BGH2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.41■□□□□ 0.86
Samm50Q8BGH2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Samm50Q8BGH2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Samm50Q8BGH2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.39■□□□□ 0.86
Samm50Q8BGH2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Samm50Q8BGH2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Samm50Q8BGH2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.39■□□□□ 0.86
Samm50Q8BGH2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Samm50Q8BGH2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Samm50Q8BGH2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Gm11927-201ENSMUST00000118472 759 ntBASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Samm50Q8BGH2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms