Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Trim62Q80V85 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim62Q80V85 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Trim62Q80V85 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Gm12085-201ENSMUST00000119263 940 ntBASIC18.04■□□□□ 0.48
Trim62Q80V85 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim62Q80V85 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Trim62Q80V85 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim62Q80V85 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim62Q80V85 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim62Q80V85 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim62Q80V85 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim62Q80V85 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim62Q80V85 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Trim62Q80V85 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim62Q80V85 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim62Q80V85 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.02■□□□□ 0.48
Trim62Q80V85 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.02■□□□□ 0.48
Trim62Q80V85 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.02■□□□□ 0.48
Trim62Q80V85 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trim62Q80V85 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim62Q80V85 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Gm27463-201ENSMUST00000183569 57 ntBASIC18.02■□□□□ 0.48
Trim62Q80V85 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim62Q80V85 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim62Q80V85 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.02■□□□□ 0.47
Trim62Q80V85 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Trim62Q80V85 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.02■□□□□ 0.47
Trim62Q80V85 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim62Q80V85 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim62Q80V85 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim62Q80V85 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim62Q80V85 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim62Q80V85 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim62Q80V85 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim62Q80V85 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim62Q80V85 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim62Q80V85 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim62Q80V85 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.01■□□□□ 0.47
Trim62Q80V85 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim62Q80V85 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.01■□□□□ 0.47
Trim62Q80V85 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.01■□□□□ 0.47
Trim62Q80V85 Gm5417-201ENSMUST00000079706 384 ntBASIC18.01■□□□□ 0.47
Trim62Q80V85 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Trim62Q80V85 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim62Q80V85 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim62Q80V85 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim62Q80V85 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trim62Q80V85 Fam105a-203ENSMUST00000226170 3043 ntBASIC18■□□□□ 0.47
Trim62Q80V85 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim62Q80V85 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim62Q80V85 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim62Q80V85 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18■□□□□ 0.47
Trim62Q80V85 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim62Q80V85 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim62Q80V85 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim62Q80V85 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Trim62Q80V85 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms