Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rnf139Q7TMV1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Mir5122-201ENSMUST00000175004 89 ntBASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf139Q7TMV1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Timm23-208ENSMUST00000226683 750 ntBASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf139Q7TMV1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf139Q7TMV1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf139Q7TMV1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf139Q7TMV1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf139Q7TMV1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rnf139Q7TMV1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rnf139Q7TMV1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rnf139Q7TMV1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf139Q7TMV1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.58■□□□□ 0.56
Rnf139Q7TMV1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms