Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vma21Q78T54 Gm5075-201ENSMUST00000196916 622 ntBASIC14.22□□□□□ -0.13
Vma21Q78T54 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vma21Q78T54 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.22□□□□□ -0.13
Vma21Q78T54 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.22□□□□□ -0.13
Vma21Q78T54 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vma21Q78T54 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.22□□□□□ -0.13
Vma21Q78T54 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vma21Q78T54 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Vma21Q78T54 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Gm2399-201ENSMUST00000104944 225 ntBASIC14.21□□□□□ -0.13
Vma21Q78T54 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
Vma21Q78T54 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Vma21Q78T54 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vma21Q78T54 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.21□□□□□ -0.13
Vma21Q78T54 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vma21Q78T54 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
Vma21Q78T54 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vma21Q78T54 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vma21Q78T54 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vma21Q78T54 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vma21Q78T54 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vma21Q78T54 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Vma21Q78T54 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.21□□□□□ -0.14
Vma21Q78T54 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vma21Q78T54 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.2□□□□□ -0.14
Vma21Q78T54 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Gm38285-201ENSMUST00000192928 922 ntBASIC14.2□□□□□ -0.14
Vma21Q78T54 Gm29791-202ENSMUST00000207888 369 ntBASIC14.2□□□□□ -0.14
Vma21Q78T54 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.2□□□□□ -0.14
Vma21Q78T54 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.2□□□□□ -0.14
Vma21Q78T54 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.2□□□□□ -0.14
Vma21Q78T54 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vma21Q78T54 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vma21Q78T54 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vma21Q78T54 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.19□□□□□ -0.14
Vma21Q78T54 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.19□□□□□ -0.14
Vma21Q78T54 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.19□□□□□ -0.14
Vma21Q78T54 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.19□□□□□ -0.14
Vma21Q78T54 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.19□□□□□ -0.14
Vma21Q78T54 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vma21Q78T54 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.18□□□□□ -0.14
Vma21Q78T54 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms