Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sned1Q70E20 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Sned1Q70E20 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sned1Q70E20 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sned1Q70E20 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sned1Q70E20 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.11■□□□□ 0.97
Sned1Q70E20 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sned1Q70E20 Gm11779-201ENSMUST00000118541 368 ntBASIC21.11■□□□□ 0.97
Sned1Q70E20 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.11■□□□□ 0.97
Sned1Q70E20 AC108846.1-201ENSMUST00000214531 513 ntBASIC21.11■□□□□ 0.97
Sned1Q70E20 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Sned1Q70E20 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sned1Q70E20 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.1■□□□□ 0.97
Sned1Q70E20 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.1■□□□□ 0.97
Sned1Q70E20 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21.1■□□□□ 0.97
Sned1Q70E20 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC21.1■□□□□ 0.97
Sned1Q70E20 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.1■□□□□ 0.97
Sned1Q70E20 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sned1Q70E20 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.09■□□□□ 0.97
Sned1Q70E20 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 Gm13186-201ENSMUST00000118031 316 ntBASIC21.09■□□□□ 0.97
Sned1Q70E20 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.09■□□□□ 0.97
Sned1Q70E20 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC21.09■□□□□ 0.97
Sned1Q70E20 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sned1Q70E20 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Sned1Q70E20 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sned1Q70E20 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sned1Q70E20 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.08■□□□□ 0.97
Sned1Q70E20 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC21.08■□□□□ 0.97
Sned1Q70E20 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sned1Q70E20 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sned1Q70E20 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sned1Q70E20 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sned1Q70E20 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sned1Q70E20 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sned1Q70E20 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sned1Q70E20 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sned1Q70E20 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
Sned1Q70E20 Gm27000-201ENSMUST00000182943 842 ntBASIC21.07■□□□□ 0.96
Sned1Q70E20 Gm27702-201ENSMUST00000184512 56 ntBASIC21.07■□□□□ 0.96
Sned1Q70E20 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sned1Q70E20 Gm6376-201ENSMUST00000209407 580 ntBASIC21.07■□□□□ 0.96
Sned1Q70E20 Gm5364-201ENSMUST00000216789 889 ntBASIC21.07■□□□□ 0.96
Sned1Q70E20 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sned1Q70E20 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sned1Q70E20 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sned1Q70E20 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.07■□□□□ 0.96
Sned1Q70E20 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sned1Q70E20 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sned1Q70E20 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sned1Q70E20 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sned1Q70E20 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sned1Q70E20 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.06■□□□□ 0.96
Sned1Q70E20 Gm10060-201ENSMUST00000212002 111 ntBASIC21.06■□□□□ 0.96
Sned1Q70E20 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.06■□□□□ 0.96
Sned1Q70E20 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sned1Q70E20 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.06■□□□□ 0.96
Sned1Q70E20 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sned1Q70E20 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sned1Q70E20 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.06■□□□□ 0.96
Sned1Q70E20 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sned1Q70E20 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Sned1Q70E20 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sned1Q70E20 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sned1Q70E20 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.05■□□□□ 0.96
Sned1Q70E20 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC21.05■□□□□ 0.96
Sned1Q70E20 Mir5126-201ENSMUST00000175513 77 ntBASIC21.05■□□□□ 0.96
Sned1Q70E20 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sned1Q70E20 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sned1Q70E20 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sned1Q70E20 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms