Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nup188Q6ZQH8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup188Q6ZQH8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup188Q6ZQH8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nup188Q6ZQH8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.74■□□□□ 0.91
Nup188Q6ZQH8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Nup188Q6ZQH8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup188Q6ZQH8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup188Q6ZQH8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup188Q6ZQH8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Gm27000-201ENSMUST00000182943 842 ntBASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup188Q6ZQH8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup188Q6ZQH8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Nup188Q6ZQH8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.7■□□□□ 0.9
Nup188Q6ZQH8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.7■□□□□ 0.9
Nup188Q6ZQH8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup188Q6ZQH8 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.7■□□□□ 0.9
Nup188Q6ZQH8 Birc2-201ENSMUST00000054878 378 ntBASIC20.7■□□□□ 0.9
Nup188Q6ZQH8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup188Q6ZQH8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup188Q6ZQH8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup188Q6ZQH8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nup188Q6ZQH8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Gm27525-201ENSMUST00000184465 107 ntBASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup188Q6ZQH8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Gm18733-201ENSMUST00000173950 856 ntBASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nup188Q6ZQH8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.67■□□□□ 0.9
Nup188Q6ZQH8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.67■□□□□ 0.9
Nup188Q6ZQH8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup188Q6ZQH8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.67■□□□□ 0.9
Nup188Q6ZQH8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Nup188Q6ZQH8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.67■□□□□ 0.9
Nup188Q6ZQH8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.67■□□□□ 0.9
Nup188Q6ZQH8 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.67■□□□□ 0.9
Nup188Q6ZQH8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup188Q6ZQH8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup188Q6ZQH8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup188Q6ZQH8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.66■□□□□ 0.9
Nup188Q6ZQH8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms