Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Npc1l1Q6T3U4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1l1Q6T3U4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1l1Q6T3U4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Npc1l1Q6T3U4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Npc1l1Q6T3U4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Npc1l1Q6T3U4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
Npc1l1Q6T3U4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 AA414768-201ENSMUST00000121924 1257 ntBASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1l1Q6T3U4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Mir5130-201ENSMUST00000175160 84 ntBASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1l1Q6T3U4 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1l1Q6T3U4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Npc1l1Q6T3U4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1l1Q6T3U4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Gm2274-201ENSMUST00000184539 609 ntBASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Gm33142-201ENSMUST00000193913 867 ntBASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Gm37025-201ENSMUST00000195159 829 ntBASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Npc1l1Q6T3U4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Gm7638-201ENSMUST00000121348 967 ntBASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Il3ra-202ENSMUST00000223589 738 ntBASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Npc1l1Q6T3U4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.83■□□□□ 0.92
Npc1l1Q6T3U4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Npc1l1Q6T3U4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Npc1l1Q6T3U4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Npc1l1Q6T3U4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Npc1l1Q6T3U4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Npc1l1Q6T3U4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.83■□□□□ 0.92
Npc1l1Q6T3U4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms