Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.52■□□□□ 0.24
Rnf220Q6PDX6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Rnf220Q6PDX6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf220Q6PDX6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf220Q6PDX6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf220Q6PDX6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rnf220Q6PDX6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf220Q6PDX6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf220Q6PDX6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Gm26833-201ENSMUST00000180899 440 ntBASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rnf220Q6PDX6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf220Q6PDX6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf220Q6PDX6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf220Q6PDX6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms