Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Mir6349-201ENSMUST00000184059 97 ntBASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf6Q6NVF9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Gm13401-201ENSMUST00000117074 291 ntBASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Gm15375-201ENSMUST00000119510 849 ntBASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Gm12441-201ENSMUST00000121806 588 ntBASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Gm27275-201ENSMUST00000184318 272 ntBASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf6Q6NVF9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cpsf6Q6NVF9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Mir8112-201ENSMUST00000184382 131 ntBASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Gm20049-201ENSMUST00000219950 730 ntBASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf6Q6NVF9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms