Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Frem1Q684R7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Frem1Q684R7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Frem1Q684R7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.17■□□□□ 0.02
Frem1Q684R7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Frem1Q684R7 Gm24841-201ENSMUST00000158676 357 ntBASIC15.17■□□□□ 0.02
Frem1Q684R7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.17■□□□□ 0.02
Frem1Q684R7 Gm7370-201ENSMUST00000219471 767 ntBASIC15.17■□□□□ 0.02
Frem1Q684R7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Frem1Q684R7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Frem1Q684R7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Frem1Q684R7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Frem1Q684R7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Frem1Q684R7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Frem1Q684R7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Frem1Q684R7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Frem1Q684R7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Frem1Q684R7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Frem1Q684R7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Frem1Q684R7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Frem1Q684R7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Frem1Q684R7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Frem1Q684R7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Frem1Q684R7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.15■□□□□ 0.02
Frem1Q684R7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Frem1Q684R7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.15■□□□□ 0.02
Frem1Q684R7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Frem1Q684R7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.15■□□□□ 0.02
Frem1Q684R7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Frem1Q684R7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Frem1Q684R7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Frem1Q684R7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Frem1Q684R7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Frem1Q684R7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.14■□□□□ 0.01
Frem1Q684R7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Frem1Q684R7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.14■□□□□ 0.01
Frem1Q684R7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Frem1Q684R7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.14■□□□□ 0.01
Frem1Q684R7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.14■□□□□ 0.01
Frem1Q684R7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Frem1Q684R7 Gm9731-201ENSMUST00000209480 747 ntBASIC15.14■□□□□ 0.01
Frem1Q684R7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Frem1Q684R7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Frem1Q684R7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Frem1Q684R7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Frem1Q684R7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Frem1Q684R7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Frem1Q684R7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Frem1Q684R7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.13■□□□□ 0.01
Frem1Q684R7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.13■□□□□ 0.01
Frem1Q684R7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Frem1Q684R7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Frem1Q684R7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
Frem1Q684R7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Frem1Q684R7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Frem1Q684R7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Frem1Q684R7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Gm14859-201ENSMUST00000117752 357 ntBASIC15.12■□□□□ 0.01
Frem1Q684R7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Frem1Q684R7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Frem1Q684R7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Frem1Q684R7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Frem1Q684R7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.12■□□□□ 0.01
Frem1Q684R7 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms