Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Six1Q62231 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six1Q62231 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six1Q62231 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Six1Q62231 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six1Q62231 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Six1Q62231 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.88■□□□□ 0.45
Six1Q62231 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.88■□□□□ 0.45
Six1Q62231 Gm5408-201ENSMUST00000197998 747 ntBASIC17.88■□□□□ 0.45
Six1Q62231 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Six1Q62231 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six1Q62231 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six1Q62231 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.87■□□□□ 0.45
Six1Q62231 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.87■□□□□ 0.45
Six1Q62231 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six1Q62231 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Six1Q62231 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Six1Q62231 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.87■□□□□ 0.45
Six1Q62231 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.87■□□□□ 0.45
Six1Q62231 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.87■□□□□ 0.45
Six1Q62231 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Six1Q62231 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.87■□□□□ 0.45
Six1Q62231 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Six1Q62231 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six1Q62231 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Six1Q62231 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.86■□□□□ 0.45
Six1Q62231 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Six1Q62231 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Six1Q62231 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six1Q62231 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Six1Q62231 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six1Q62231 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.85■□□□□ 0.45
Six1Q62231 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.85■□□□□ 0.45
Six1Q62231 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six1Q62231 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six1Q62231 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six1Q62231 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Six1Q62231 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six1Q62231 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six1Q62231 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six1Q62231 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six1Q62231 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six1Q62231 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six1Q62231 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six1Q62231 Gm12896-201ENSMUST00000118430 226 ntBASIC17.84■□□□□ 0.45
Six1Q62231 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.84■□□□□ 0.45
Six1Q62231 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Six1Q62231 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Six1Q62231 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Six1Q62231 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six1Q62231 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six1Q62231 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six1Q62231 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.84■□□□□ 0.45
Six1Q62231 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six1Q62231 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six1Q62231 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.83■□□□□ 0.45
Six1Q62231 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six1Q62231 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six1Q62231 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six1Q62231 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six1Q62231 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six1Q62231 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six1Q62231 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.83■□□□□ 0.44
Six1Q62231 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six1Q62231 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Six1Q62231 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six1Q62231 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Six1Q62231 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six1Q62231 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Six1Q62231 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms