Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.31■□□□□ 0.68
Ift88Q61371 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.31■□□□□ 0.68
Ift88Q61371 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ift88Q61371 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.31■□□□□ 0.68
Ift88Q61371 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ift88Q61371 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ift88Q61371 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ift88Q61371 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ift88Q61371 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ift88Q61371 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ift88Q61371 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ift88Q61371 Gm18284-201ENSMUST00000172604 624 ntBASIC19.3■□□□□ 0.68
Ift88Q61371 Mir2861-201ENSMUST00000175539 82 ntBASIC19.3■□□□□ 0.68
Ift88Q61371 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ift88Q61371 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.3■□□□□ 0.68
Ift88Q61371 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ift88Q61371 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ift88Q61371 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ift88Q61371 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ift88Q61371 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Ift88Q61371 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ift88Q61371 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ift88Q61371 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ift88Q61371 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.29■□□□□ 0.68
Ift88Q61371 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ift88Q61371 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ift88Q61371 Gm42569-201ENSMUST00000200539 472 ntBASIC19.29■□□□□ 0.68
Ift88Q61371 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ift88Q61371 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ift88Q61371 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ift88Q61371 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.29■□□□□ 0.68
Ift88Q61371 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ift88Q61371 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ift88Q61371 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.29■□□□□ 0.68
Ift88Q61371 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.29■□□□□ 0.68
Ift88Q61371 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ift88Q61371 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.28■□□□□ 0.68
Ift88Q61371 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ift88Q61371 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Ift88Q61371 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.28■□□□□ 0.68
Ift88Q61371 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.28■□□□□ 0.68
Ift88Q61371 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.28■□□□□ 0.68
Ift88Q61371 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ift88Q61371 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ift88Q61371 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.28■□□□□ 0.68
Ift88Q61371 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Ift88Q61371 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ift88Q61371 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ift88Q61371 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Gm26524-201ENSMUST00000192339 390 ntBASIC19.27■□□□□ 0.68
Ift88Q61371 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ift88Q61371 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.27■□□□□ 0.68
Ift88Q61371 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ift88Q61371 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.27■□□□□ 0.67
Ift88Q61371 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ift88Q61371 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ift88Q61371 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ift88Q61371 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ift88Q61371 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ift88Q61371 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ift88Q61371 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ift88Q61371 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ift88Q61371 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ift88Q61371 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ift88Q61371 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Ift88Q61371 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ift88Q61371 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ift88Q61371 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ift88Q61371 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
Ift88Q61371 Gm13148-201ENSMUST00000118892 745 ntBASIC19.26■□□□□ 0.67
Ift88Q61371 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ift88Q61371 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ift88Q61371 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ift88Q61371 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ift88Q61371 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms