Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.84■□□□□ 0.45
Slc6a4Q60857 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Gm37025-201ENSMUST00000195159 829 ntBASIC17.84■□□□□ 0.45
Slc6a4Q60857 Gm9731-201ENSMUST00000209480 747 ntBASIC17.84■□□□□ 0.45
Slc6a4Q60857 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.84■□□□□ 0.45
Slc6a4Q60857 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Slc6a4Q60857 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a4Q60857 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a4Q60857 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a4Q60857 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a4Q60857 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a4Q60857 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.83■□□□□ 0.44
Slc6a4Q60857 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.83■□□□□ 0.44
Slc6a4Q60857 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Slc6a4Q60857 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a4Q60857 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a4Q60857 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a4Q60857 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Slc6a4Q60857 Gm45058-201ENSMUST00000205810 766 ntBASIC17.83■□□□□ 0.44
Slc6a4Q60857 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
Slc6a4Q60857 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a4Q60857 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a4Q60857 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Slc6a4Q60857 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.81■□□□□ 0.44
Slc6a4Q60857 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.81■□□□□ 0.44
Slc6a4Q60857 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Mir5130-201ENSMUST00000175160 84 ntBASIC17.81■□□□□ 0.44
Slc6a4Q60857 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a4Q60857 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Il3ra-202ENSMUST00000223589 738 ntBASIC17.8■□□□□ 0.44
Slc6a4Q60857 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a4Q60857 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Gm17661-201ENSMUST00000170317 270 ntBASIC17.79■□□□□ 0.44
Slc6a4Q60857 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms