Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Gm21814-202ENSMUST00000203277 873 ntBASIC16.66■□□□□ 0.26
Xrcc1Q60596 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Xrcc1Q60596 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Xrcc1Q60596 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Xrcc1Q60596 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xrcc1Q60596 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Gm37055-201ENSMUST00000191866 133 ntBASIC16.65■□□□□ 0.26
Xrcc1Q60596 Timm23-208ENSMUST00000226683 750 ntBASIC16.65■□□□□ 0.26
Xrcc1Q60596 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xrcc1Q60596 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.64■□□□□ 0.25
Xrcc1Q60596 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Mir8112-201ENSMUST00000184382 131 ntBASIC16.64■□□□□ 0.25
Xrcc1Q60596 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.64■□□□□ 0.25
Xrcc1Q60596 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Odf3b-204ENSMUST00000227834 930 ntBASIC16.64■□□□□ 0.25
Xrcc1Q60596 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Xrcc1Q60596 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Xrcc1Q60596 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Mir6982-201ENSMUST00000184354 68 ntBASIC16.63■□□□□ 0.25
Xrcc1Q60596 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Xrcc1Q60596 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.63■□□□□ 0.25
Xrcc1Q60596 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Gm12085-201ENSMUST00000119263 940 ntBASIC16.62■□□□□ 0.25
Xrcc1Q60596 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.62■□□□□ 0.25
Xrcc1Q60596 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Xrcc1Q60596 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms