Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps54Q5SPW0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Vps54Q5SPW0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.92■□□□□ 0.94
Vps54Q5SPW0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vps54Q5SPW0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Vps54Q5SPW0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps54Q5SPW0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.92■□□□□ 0.94
Vps54Q5SPW0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps54Q5SPW0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.92■□□□□ 0.94
Vps54Q5SPW0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps54Q5SPW0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Gm7791-201ENSMUST00000219066 539 ntBASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps54Q5SPW0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps54Q5SPW0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps54Q5SPW0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Vps54Q5SPW0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps54Q5SPW0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.88■□□□□ 0.93
Vps54Q5SPW0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Gm7889-201ENSMUST00000185591 958 ntBASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Gm9987-201ENSMUST00000069768 567 ntBASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps54Q5SPW0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Vps54Q5SPW0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Vps54Q5SPW0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps54Q5SPW0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.86■□□□□ 0.93
Vps54Q5SPW0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Vps54Q5SPW0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps54Q5SPW0 Gm6433-201ENSMUST00000118634 875 ntBASIC20.86■□□□□ 0.93
Vps54Q5SPW0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps54Q5SPW0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps54Q5SPW0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms