Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col27a1Q5QNQ9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col27a1Q5QNQ9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col27a1Q5QNQ9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col27a1Q5QNQ9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col27a1Q5QNQ9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col27a1Q5QNQ9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.87■□□□□ 0.29
Col27a1Q5QNQ9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Gm6736-201ENSMUST00000166583 948 ntBASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Mir8112-201ENSMUST00000184382 131 ntBASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col27a1Q5QNQ9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col27a1Q5QNQ9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Gm23935-201ENSMUST00000102303 57 ntBASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Gm24270-201ENSMUST00000102326 57 ntBASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Gm24245-201ENSMUST00000157318 57 ntBASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Gm7862-201ENSMUST00000121461 292 ntBASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col27a1Q5QNQ9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.83■□□□□ 0.29
Col27a1Q5QNQ9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col27a1Q5QNQ9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col27a1Q5QNQ9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 Psmb5-202ENSMUST00000227257 622 ntBASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col27a1Q5QNQ9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms