Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf43Q5NCP0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Gm28033-201ENSMUST00000184224 96 ntBASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf43Q5NCP0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Gm37025-201ENSMUST00000195159 829 ntBASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Gm29791-202ENSMUST00000207888 369 ntBASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rnf43Q5NCP0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Gm17807-201ENSMUST00000186869 298 ntBASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Gm17808-201ENSMUST00000200859 894 ntBASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Gm7213-201ENSMUST00000215977 950 ntBASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Tgds-204ENSMUST00000228543 1594 ntBASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf43Q5NCP0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf43Q5NCP0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Gm11355-201ENSMUST00000121120 306 ntBASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Gm18669-201ENSMUST00000216049 778 ntBASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf43Q5NCP0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms