Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf20Q5DTM8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Gm12382-201ENSMUST00000122005 922 ntBASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf20Q5DTM8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Gm5643-201ENSMUST00000117081 966 ntBASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf20Q5DTM8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Gm37292-201ENSMUST00000192062 758 ntBASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf20Q5DTM8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 Gm20760-201ENSMUST00000179197 648 ntBASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rnf20Q5DTM8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rnf20Q5DTM8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Gm15378-201ENSMUST00000121894 207 ntBASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf20Q5DTM8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms