Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Gm10418-201ENSMUST00000100943 576 ntBASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Lin28bQ45KJ6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lin28bQ45KJ6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Gm22697-201ENSMUST00000175194 63 ntBASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lin28bQ45KJ6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 AA414768-201ENSMUST00000121924 1257 ntBASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Gm6345-202ENSMUST00000180900 204 ntBASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28bQ45KJ6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms