Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg11Q3UHA3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.08■□□□□ 0.17
Spg11Q3UHA3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Spg11Q3UHA3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Spg11Q3UHA3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Spg11Q3UHA3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Spg11Q3UHA3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.08■□□□□ 0.16
Spg11Q3UHA3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.08■□□□□ 0.16
Spg11Q3UHA3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Spg11Q3UHA3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Spg11Q3UHA3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Spg11Q3UHA3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Rprl3-201ENSMUST00000157400 290 ntBASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Spg11Q3UHA3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Gm23547-201ENSMUST00000158210 271 ntBASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Gm11336-201ENSMUST00000118168 334 ntBASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Mir6956-201ENSMUST00000183598 62 ntBASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.06■□□□□ 0.16
Spg11Q3UHA3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Gm11025-201ENSMUST00000140773 466 ntBASIC16.05■□□□□ 0.16
Spg11Q3UHA3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Gm44872-201ENSMUST00000207864 420 ntBASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Gm5745-201ENSMUST00000183748 313 ntBASIC16.05■□□□□ 0.16
Spg11Q3UHA3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.05■□□□□ 0.16
Spg11Q3UHA3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms