Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cul4aQ3TCH7 Haglr-201ENSMUST00000100000 2085 ntBASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cul4aQ3TCH7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Gm10138-203ENSMUST00000206952 366 ntBASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Cul4aQ3TCH7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cul4aQ3TCH7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Dio3-201ENSMUST00000097228 1449 ntBASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Gm12933-201ENSMUST00000120203 872 ntBASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.27■□□□□ 0.52
Cul4aQ3TCH7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms