Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.12■□□□□ 0.49
IhhP97812 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.12■□□□□ 0.49
IhhP97812 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IhhP97812 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
IhhP97812 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.11■□□□□ 0.49
IhhP97812 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.11■□□□□ 0.49
IhhP97812 Gm37025-201ENSMUST00000195159 829 ntBASIC18.11■□□□□ 0.49
IhhP97812 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
IhhP97812 Il3ra-202ENSMUST00000223589 738 ntBASIC18.11■□□□□ 0.49
IhhP97812 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IhhP97812 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
IhhP97812 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
IhhP97812 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IhhP97812 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.1■□□□□ 0.49
IhhP97812 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IhhP97812 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.1■□□□□ 0.49
IhhP97812 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
IhhP97812 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IhhP97812 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IhhP97812 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IhhP97812 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IhhP97812 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IhhP97812 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IhhP97812 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
IhhP97812 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IhhP97812 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IhhP97812 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IhhP97812 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.09■□□□□ 0.49
IhhP97812 Gm7370-201ENSMUST00000219471 767 ntBASIC18.09■□□□□ 0.49
IhhP97812 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.09■□□□□ 0.49
IhhP97812 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.09■□□□□ 0.49
IhhP97812 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
IhhP97812 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
IhhP97812 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IhhP97812 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IhhP97812 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
IhhP97812 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.08■□□□□ 0.49
IhhP97812 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
IhhP97812 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IhhP97812 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IhhP97812 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IhhP97812 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IhhP97812 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IhhP97812 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.08■□□□□ 0.48
IhhP97812 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.08■□□□□ 0.48
IhhP97812 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IhhP97812 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IhhP97812 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IhhP97812 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
IhhP97812 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
IhhP97812 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
IhhP97812 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
IhhP97812 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
IhhP97812 Gm13836-201ENSMUST00000121159 501 ntBASIC18.07■□□□□ 0.48
IhhP97812 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.07■□□□□ 0.48
IhhP97812 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
IhhP97812 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IhhP97812 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.06■□□□□ 0.48
IhhP97812 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IhhP97812 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IhhP97812 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms