Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.91■□□□□ 0.62
CiitaP79621 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CiitaP79621 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CiitaP79621 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.89■□□□□ 0.61
CiitaP79621 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CiitaP79621 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CiitaP79621 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CiitaP79621 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CiitaP79621 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CiitaP79621 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CiitaP79621 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CiitaP79621 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CiitaP79621 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
CiitaP79621 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.89■□□□□ 0.61
CiitaP79621 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CiitaP79621 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.89■□□□□ 0.61
CiitaP79621 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.89■□□□□ 0.61
CiitaP79621 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CiitaP79621 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.88■□□□□ 0.61
CiitaP79621 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CiitaP79621 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.88■□□□□ 0.61
CiitaP79621 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CiitaP79621 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CiitaP79621 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.88■□□□□ 0.61
CiitaP79621 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.88■□□□□ 0.61
CiitaP79621 Grk6-206ENSMUST00000224995 2971 ntBASIC18.88■□□□□ 0.61
CiitaP79621 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CiitaP79621 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CiitaP79621 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.87■□□□□ 0.61
CiitaP79621 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.87■□□□□ 0.61
CiitaP79621 Gm18032-201ENSMUST00000222541 538 ntBASIC18.87■□□□□ 0.61
CiitaP79621 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.87■□□□□ 0.61
CiitaP79621 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CiitaP79621 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.86■□□□□ 0.61
CiitaP79621 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CiitaP79621 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CiitaP79621 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CiitaP79621 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CiitaP79621 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.85■□□□□ 0.61
CiitaP79621 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CiitaP79621 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Mir5130-201ENSMUST00000175160 84 ntBASIC18.85■□□□□ 0.61
CiitaP79621 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.85■□□□□ 0.61
CiitaP79621 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.85■□□□□ 0.61
CiitaP79621 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Gm7370-201ENSMUST00000219471 767 ntBASIC18.85■□□□□ 0.61
CiitaP79621 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms