Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3aP68433 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.19■□□□□ 0.02
Hist1h3aP68433 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.19■□□□□ 0.02
Hist1h3aP68433 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.19■□□□□ 0.02
Hist1h3aP68433 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3aP68433 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3aP68433 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.17■□□□□ 0.02
Hist1h3aP68433 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.17■□□□□ 0.02
Hist1h3aP68433 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hist1h3aP68433 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.16■□□□□ 0.02
Hist1h3aP68433 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h3aP68433 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Gm10653-202ENSMUST00000139570 835 ntBASIC15.15■□□□□ 0.02
Hist1h3aP68433 Gm43183-201ENSMUST00000200632 547 ntBASIC15.15■□□□□ 0.02
Hist1h3aP68433 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.15■□□□□ 0.02
Hist1h3aP68433 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h3aP68433 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms