Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.43■□□□□ 0.38
Lim2P56563 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.43■□□□□ 0.38
Lim2P56563 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Lim2P56563 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lim2P56563 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.42■□□□□ 0.38
Lim2P56563 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.42■□□□□ 0.38
Lim2P56563 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.42■□□□□ 0.38
Lim2P56563 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lim2P56563 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lim2P56563 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.41■□□□□ 0.38
Lim2P56563 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.41■□□□□ 0.38
Lim2P56563 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Lim2P56563 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Lim2P56563 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.41■□□□□ 0.38
Lim2P56563 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lim2P56563 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.41■□□□□ 0.38
Lim2P56563 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lim2P56563 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.4■□□□□ 0.38
Lim2P56563 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lim2P56563 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lim2P56563 Gm10517-202ENSMUST00000192970 758 ntBASIC17.4■□□□□ 0.38
Lim2P56563 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Lim2P56563 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.4■□□□□ 0.38
Lim2P56563 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lim2P56563 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lim2P56563 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lim2P56563 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.4■□□□□ 0.38
Lim2P56563 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lim2P56563 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Lim2P56563 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.39■□□□□ 0.37
Lim2P56563 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Mir5122-201ENSMUST00000175004 89 ntBASIC17.39■□□□□ 0.37
Lim2P56563 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Mir8112-201ENSMUST00000184382 131 ntBASIC17.39■□□□□ 0.37
Lim2P56563 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lim2P56563 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lim2P56563 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lim2P56563 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lim2P56563 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lim2P56563 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.38■□□□□ 0.37
Lim2P56563 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lim2P56563 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lim2P56563 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.38■□□□□ 0.37
Lim2P56563 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.38■□□□□ 0.37
Lim2P56563 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Lim2P56563 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lim2P56563 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.38■□□□□ 0.37
Lim2P56563 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms