Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm9731-201ENSMUST00000209480 747 ntBASIC22.15■■□□□ 1.14
Msh6P54276 Gm7213-201ENSMUST00000215977 950 ntBASIC22.15■■□□□ 1.14
Msh6P54276 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Msh6P54276 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Msh6P54276 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Msh6P54276 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Msh6P54276 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Msh6P54276 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Msh6P54276 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Msh6P54276 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
Msh6P54276 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Msh6P54276 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Msh6P54276 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Msh6P54276 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Msh6P54276 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Msh6P54276 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Msh6P54276 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
Msh6P54276 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Msh6P54276 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Msh6P54276 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Msh6P54276 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC22.13■■□□□ 1.13
Msh6P54276 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC22.13■■□□□ 1.13
Msh6P54276 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Msh6P54276 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Msh6P54276 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Msh6P54276 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Msh6P54276 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Msh6P54276 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Msh6P54276 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC22.13■■□□□ 1.13
Msh6P54276 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Msh6P54276 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Msh6P54276 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Msh6P54276 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Msh6P54276 Gm27357-201ENSMUST00000183754 135 ntBASIC22.12■■□□□ 1.13
Msh6P54276 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Msh6P54276 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Msh6P54276 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Msh6P54276 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Msh6P54276 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC22.12■■□□□ 1.13
Msh6P54276 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC22.12■■□□□ 1.13
Msh6P54276 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Msh6P54276 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Msh6P54276 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Msh6P54276 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Msh6P54276 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 Grk6-206ENSMUST00000224995 2971 ntBASIC22.11■■□□□ 1.13
Msh6P54276 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Msh6P54276 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC22.11■■□□□ 1.13
Msh6P54276 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Msh6P54276 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Msh6P54276 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Msh6P54276 Fam105a-203ENSMUST00000226170 3043 ntBASIC22.1■■□□□ 1.13
Msh6P54276 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.1■■□□□ 1.13
Msh6P54276 Gm19721-201ENSMUST00000195284 1764 ntBASIC22.1■■□□□ 1.13
Msh6P54276 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Msh6P54276 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Msh6P54276 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC22.1■■□□□ 1.13
Msh6P54276 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Msh6P54276 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC22.1■■□□□ 1.13
Msh6P54276 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC22.1■■□□□ 1.13
Msh6P54276 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Msh6P54276 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Msh6P54276 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Msh6P54276 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Dmtn-207ENSMUST00000228001 2437 ntBASIC22.09■■□□□ 1.13
Msh6P54276 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
Msh6P54276 Gm11355-201ENSMUST00000121120 306 ntBASIC22.09■■□□□ 1.13
Msh6P54276 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC22.09■■□□□ 1.13
Msh6P54276 Gm18958-201ENSMUST00000174258 762 ntBASIC22.09■■□□□ 1.13
Msh6P54276 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Msh6P54276 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC22.09■■□□□ 1.13
Msh6P54276 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msh6P54276 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Msh6P54276 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
Msh6P54276 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Msh6P54276 Gm11950-201ENSMUST00000121615 838 ntBASIC22.08■■□□□ 1.12
Msh6P54276 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.12
Msh6P54276 Gm37025-201ENSMUST00000195159 829 ntBASIC22.08■■□□□ 1.12
Msh6P54276 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms