Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lhx3P50481 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lhx3P50481 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
Lhx3P50481 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.67■□□□□ 0.42
Lhx3P50481 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Lhx3P50481 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.67■□□□□ 0.42
Lhx3P50481 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx3P50481 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.66■□□□□ 0.42
Lhx3P50481 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.66■□□□□ 0.42
Lhx3P50481 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx3P50481 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lhx3P50481 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lhx3P50481 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.66■□□□□ 0.42
Lhx3P50481 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx3P50481 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.66■□□□□ 0.42
Lhx3P50481 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.66■□□□□ 0.42
Lhx3P50481 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lhx3P50481 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx3P50481 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx3P50481 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx3P50481 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx3P50481 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lhx3P50481 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx3P50481 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx3P50481 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Lhx3P50481 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lhx3P50481 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Lhx3P50481 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.65■□□□□ 0.42
Lhx3P50481 Il3ra-202ENSMUST00000223589 738 ntBASIC17.65■□□□□ 0.42
Lhx3P50481 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.65■□□□□ 0.42
Lhx3P50481 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.65■□□□□ 0.42
Lhx3P50481 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx3P50481 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.65■□□□□ 0.42
Lhx3P50481 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lhx3P50481 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Lhx3P50481 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.64■□□□□ 0.41
Lhx3P50481 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Lhx3P50481 Gm7889-201ENSMUST00000185591 958 ntBASIC17.64■□□□□ 0.41
Lhx3P50481 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Lhx3P50481 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx3P50481 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx3P50481 Gm6433-201ENSMUST00000118634 875 ntBASIC17.63■□□□□ 0.41
Lhx3P50481 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.63■□□□□ 0.41
Lhx3P50481 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx3P50481 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx3P50481 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lhx3P50481 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.63■□□□□ 0.41
Lhx3P50481 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx3P50481 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx3P50481 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx3P50481 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Lhx3P50481 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lhx3P50481 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lhx3P50481 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lhx3P50481 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Lhx3P50481 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lhx3P50481 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Lhx3P50481 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.62■□□□□ 0.41
Lhx3P50481 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.62■□□□□ 0.41
Lhx3P50481 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms