Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SftpbP50405 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SftpbP50405 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SftpbP50405 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SftpbP50405 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SftpbP50405 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SftpbP50405 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SftpbP50405 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.84■□□□□ 0.45
SftpbP50405 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SftpbP50405 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.84■□□□□ 0.45
SftpbP50405 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SftpbP50405 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.84■□□□□ 0.45
SftpbP50405 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.84■□□□□ 0.45
SftpbP50405 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.84■□□□□ 0.45
SftpbP50405 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Zfp783-201ENSMUST00000095946 670 ntBASIC17.84■□□□□ 0.45
SftpbP50405 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.84■□□□□ 0.45
SftpbP50405 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SftpbP50405 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SftpbP50405 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SftpbP50405 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SftpbP50405 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SftpbP50405 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
SftpbP50405 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SftpbP50405 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SftpbP50405 Gm29791-202ENSMUST00000207888 369 ntBASIC17.83■□□□□ 0.44
SftpbP50405 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SftpbP50405 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.83■□□□□ 0.44
SftpbP50405 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SftpbP50405 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SftpbP50405 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SftpbP50405 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SftpbP50405 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SftpbP50405 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SftpbP50405 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SftpbP50405 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SftpbP50405 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SftpbP50405 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SftpbP50405 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.83■□□□□ 0.44
SftpbP50405 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.82■□□□□ 0.44
SftpbP50405 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.82■□□□□ 0.44
SftpbP50405 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Gm13148-201ENSMUST00000118892 745 ntBASIC17.82■□□□□ 0.44
SftpbP50405 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.82■□□□□ 0.44
SftpbP50405 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.82■□□□□ 0.44
SftpbP50405 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.82■□□□□ 0.44
SftpbP50405 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
SftpbP50405 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SftpbP50405 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SftpbP50405 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.81■□□□□ 0.44
SftpbP50405 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SftpbP50405 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.81■□□□□ 0.44
SftpbP50405 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.81■□□□□ 0.44
SftpbP50405 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.81■□□□□ 0.44
SftpbP50405 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.81■□□□□ 0.44
SftpbP50405 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SftpbP50405 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SftpbP50405 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.8■□□□□ 0.44
SftpbP50405 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SftpbP50405 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SftpbP50405 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SftpbP50405 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms