Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VhlP40338 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VhlP40338 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VhlP40338 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VhlP40338 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.32□□□□□ -0.12
VhlP40338 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VhlP40338 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VhlP40338 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VhlP40338 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VhlP40338 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VhlP40338 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VhlP40338 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VhlP40338 Nespas-201ENSMUST00000143738 1083 ntBASIC14.31□□□□□ -0.12
VhlP40338 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.31□□□□□ -0.12
VhlP40338 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VhlP40338 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.31□□□□□ -0.12
VhlP40338 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VhlP40338 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VhlP40338 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.3□□□□□ -0.12
VhlP40338 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.3□□□□□ -0.12
VhlP40338 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VhlP40338 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
VhlP40338 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.3□□□□□ -0.12
VhlP40338 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.3□□□□□ -0.12
VhlP40338 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VhlP40338 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VhlP40338 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VhlP40338 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VhlP40338 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
VhlP40338 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VhlP40338 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VhlP40338 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VhlP40338 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VhlP40338 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.28□□□□□ -0.12
VhlP40338 Gm38285-201ENSMUST00000192928 922 ntBASIC14.28□□□□□ -0.12
VhlP40338 Gm42778-201ENSMUST00000199644 553 ntBASIC14.28□□□□□ -0.12
VhlP40338 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.28□□□□□ -0.12
VhlP40338 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
VhlP40338 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VhlP40338 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VhlP40338 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VhlP40338 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VhlP40338 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
VhlP40338 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
VhlP40338 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VhlP40338 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VhlP40338 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VhlP40338 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VhlP40338 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VhlP40338 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VhlP40338 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VhlP40338 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms