Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LdlrP35951 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.35■□□□□ 0.37
LdlrP35951 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LdlrP35951 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
LdlrP35951 Rab3c-203ENSMUST00000224180 967 ntBASIC17.35■□□□□ 0.37
LdlrP35951 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LdlrP35951 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.35■□□□□ 0.37
LdlrP35951 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LdlrP35951 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LdlrP35951 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LdlrP35951 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LdlrP35951 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.34■□□□□ 0.37
LdlrP35951 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LdlrP35951 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LdlrP35951 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LdlrP35951 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LdlrP35951 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LdlrP35951 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LdlrP35951 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LdlrP35951 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
LdlrP35951 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.33■□□□□ 0.37
LdlrP35951 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LdlrP35951 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LdlrP35951 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.33■□□□□ 0.37
LdlrP35951 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LdlrP35951 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LdlrP35951 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
LdlrP35951 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LdlrP35951 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.33■□□□□ 0.36
LdlrP35951 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LdlrP35951 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LdlrP35951 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.33■□□□□ 0.36
LdlrP35951 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LdlrP35951 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.33■□□□□ 0.36
LdlrP35951 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LdlrP35951 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LdlrP35951 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.32■□□□□ 0.36
LdlrP35951 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.32■□□□□ 0.36
LdlrP35951 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LdlrP35951 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.32■□□□□ 0.36
LdlrP35951 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LdlrP35951 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
LdlrP35951 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LdlrP35951 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LdlrP35951 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LdlrP35951 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LdlrP35951 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LdlrP35951 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LdlrP35951 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.3■□□□□ 0.36
LdlrP35951 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LdlrP35951 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms