Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RetP35546 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.31■□□□□ 0.2
RetP35546 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RetP35546 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.31■□□□□ 0.2
RetP35546 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.31■□□□□ 0.2
RetP35546 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.31■□□□□ 0.2
RetP35546 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.3■□□□□ 0.2
RetP35546 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.3■□□□□ 0.2
RetP35546 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.3■□□□□ 0.2
RetP35546 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.3■□□□□ 0.2
RetP35546 Gm21362-201ENSMUST00000194272 928 ntBASIC16.3■□□□□ 0.2
RetP35546 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RetP35546 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.3■□□□□ 0.2
RetP35546 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RetP35546 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RetP35546 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RetP35546 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RetP35546 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.29■□□□□ 0.2
RetP35546 Gm30025-201ENSMUST00000218555 728 ntBASIC16.29■□□□□ 0.2
RetP35546 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.29■□□□□ 0.2
RetP35546 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Idnk-204ENSMUST00000226010 1898 ntBASIC16.29■□□□□ 0.2
RetP35546 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RetP35546 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.28■□□□□ 0.2
RetP35546 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RetP35546 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RetP35546 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RetP35546 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RetP35546 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.27■□□□□ 0.2
RetP35546 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RetP35546 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RetP35546 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RetP35546 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.27■□□□□ 0.2
RetP35546 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RetP35546 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.27■□□□□ 0.2
RetP35546 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.27■□□□□ 0.2
RetP35546 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RetP35546 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RetP35546 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RetP35546 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.27■□□□□ 0.2
RetP35546 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RetP35546 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
RetP35546 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RetP35546 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RetP35546 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RetP35546 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RetP35546 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RetP35546 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RetP35546 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RetP35546 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RetP35546 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RetP35546 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RetP35546 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RetP35546 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms