Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab3dP35276 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Rab3dP35276 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rab3dP35276 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.62□□□□□ -0.07
Rab3dP35276 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rab3dP35276 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.61□□□□□ -0.07
Rab3dP35276 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rab3dP35276 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.61□□□□□ -0.07
Rab3dP35276 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.61□□□□□ -0.07
Rab3dP35276 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rab3dP35276 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rab3dP35276 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Rab3dP35276 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab3dP35276 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.61□□□□□ -0.07
Rab3dP35276 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rab3dP35276 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rab3dP35276 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Rab3dP35276 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Rab3dP35276 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rab3dP35276 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.6□□□□□ -0.07
Rab3dP35276 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rab3dP35276 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab3dP35276 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rab3dP35276 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rab3dP35276 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rab3dP35276 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.59□□□□□ -0.07
Rab3dP35276 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.59□□□□□ -0.07
Rab3dP35276 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab3dP35276 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rab3dP35276 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rab3dP35276 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rab3dP35276 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.58□□□□□ -0.07
Rab3dP35276 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Rab3dP35276 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rab3dP35276 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Rab3dP35276 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rab3dP35276 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rab3dP35276 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rab3dP35276 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.57□□□□□ -0.08
Rab3dP35276 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rab3dP35276 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.57□□□□□ -0.08
Rab3dP35276 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rab3dP35276 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rab3dP35276 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rab3dP35276 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms