Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf8P23611 Gm12085-201ENSMUST00000119263 940 ntBASIC18.8■□□□□ 0.6
Irf8P23611 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.8■□□□□ 0.6
Irf8P23611 Gm3375-201ENSMUST00000203929 796 ntBASIC18.8■□□□□ 0.6
Irf8P23611 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf8P23611 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Irf8P23611 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf8P23611 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf8P23611 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf8P23611 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.8■□□□□ 0.6
Irf8P23611 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf8P23611 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Irf8P23611 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf8P23611 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Irf8P23611 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.79■□□□□ 0.6
Irf8P23611 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf8P23611 Gm17661-201ENSMUST00000170317 270 ntBASIC18.79■□□□□ 0.6
Irf8P23611 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Irf8P23611 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf8P23611 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf8P23611 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf8P23611 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Irf8P23611 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.78■□□□□ 0.6
Irf8P23611 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.78■□□□□ 0.6
Irf8P23611 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.78■□□□□ 0.6
Irf8P23611 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.78■□□□□ 0.6
Irf8P23611 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf8P23611 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.78■□□□□ 0.6
Irf8P23611 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.78■□□□□ 0.6
Irf8P23611 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Irf8P23611 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.78■□□□□ 0.6
Irf8P23611 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Irf8P23611 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.77■□□□□ 0.6
Irf8P23611 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Irf8P23611 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.77■□□□□ 0.6
Irf8P23611 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.77■□□□□ 0.6
Irf8P23611 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.77■□□□□ 0.6
Irf8P23611 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Irf8P23611 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.77■□□□□ 0.6
Irf8P23611 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Irf8P23611 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Irf8P23611 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Irf8P23611 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Irf8P23611 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Irf8P23611 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Irf8P23611 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.76■□□□□ 0.59
Irf8P23611 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Irf8P23611 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Irf8P23611 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Irf8P23611 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.76■□□□□ 0.59
Irf8P23611 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Irf8P23611 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Irf8P23611 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Irf8P23611 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Irf8P23611 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Irf8P23611 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Irf8P23611 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Irf8P23611 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.75■□□□□ 0.59
Irf8P23611 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Irf8P23611 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf8P23611 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Irf8P23611 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Gm7638-201ENSMUST00000121348 967 ntBASIC18.74■□□□□ 0.59
Irf8P23611 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Gm9731-201ENSMUST00000209480 747 ntBASIC18.74■□□□□ 0.59
Irf8P23611 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Irf8P23611 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf8P23611 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf8P23611 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf8P23611 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms