Protein–RNA interactions for Protein: P17918

Pcna, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PcnaP17918 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PcnaP17918 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PcnaP17918 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.26■□□□□ 0.35
PcnaP17918 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.26■□□□□ 0.35
PcnaP17918 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.26■□□□□ 0.35
PcnaP17918 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.26■□□□□ 0.35
PcnaP17918 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PcnaP17918 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.25■□□□□ 0.35
PcnaP17918 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PcnaP17918 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Gm7290-201ENSMUST00000104990 617 ntBASIC17.25■□□□□ 0.35
PcnaP17918 Gm12918-201ENSMUST00000120234 636 ntBASIC17.25■□□□□ 0.35
PcnaP17918 Gm15710-201ENSMUST00000121821 636 ntBASIC17.25■□□□□ 0.35
PcnaP17918 Gm5075-201ENSMUST00000196916 622 ntBASIC17.25■□□□□ 0.35
PcnaP17918 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.25■□□□□ 0.35
PcnaP17918 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.25■□□□□ 0.35
PcnaP17918 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.25■□□□□ 0.35
PcnaP17918 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PcnaP17918 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.25■□□□□ 0.35
PcnaP17918 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PcnaP17918 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.25■□□□□ 0.35
PcnaP17918 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PcnaP17918 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PcnaP17918 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PcnaP17918 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PcnaP17918 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PcnaP17918 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PcnaP17918 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.24■□□□□ 0.35
PcnaP17918 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PcnaP17918 Gm38285-201ENSMUST00000192928 922 ntBASIC17.24■□□□□ 0.35
PcnaP17918 Gm37179-201ENSMUST00000194862 823 ntBASIC17.24■□□□□ 0.35
PcnaP17918 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PcnaP17918 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PcnaP17918 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PcnaP17918 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PcnaP17918 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PcnaP17918 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PcnaP17918 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.24■□□□□ 0.35
PcnaP17918 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PcnaP17918 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
PcnaP17918 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PcnaP17918 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Gm2399-201ENSMUST00000104944 225 ntBASIC17.23■□□□□ 0.35
PcnaP17918 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.23■□□□□ 0.35
PcnaP17918 Gm6211-202ENSMUST00000167849 925 ntBASIC17.23■□□□□ 0.35
PcnaP17918 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.23■□□□□ 0.35
PcnaP17918 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.23■□□□□ 0.35
PcnaP17918 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PcnaP17918 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PcnaP17918 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PcnaP17918 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PcnaP17918 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PcnaP17918 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PcnaP17918 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.22■□□□□ 0.35
PcnaP17918 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PcnaP17918 Mir5133-201ENSMUST00000174955 77 ntBASIC17.22■□□□□ 0.35
PcnaP17918 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.22■□□□□ 0.35
PcnaP17918 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.22■□□□□ 0.35
PcnaP17918 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PcnaP17918 Gm29791-202ENSMUST00000207888 369 ntBASIC17.22■□□□□ 0.35
PcnaP17918 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.22■□□□□ 0.35
PcnaP17918 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PcnaP17918 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms