Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.58■□□□□ 0.08
Hdac3O88895 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.58■□□□□ 0.08
Hdac3O88895 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Hdac3O88895 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Hdac3O88895 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hdac3O88895 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.57■□□□□ 0.08
Hdac3O88895 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Hdac3O88895 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.57■□□□□ 0.08
Hdac3O88895 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hdac3O88895 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac3O88895 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hdac3O88895 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Hdac3O88895 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Hdac3O88895 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.56■□□□□ 0.08
Hdac3O88895 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.56■□□□□ 0.08
Hdac3O88895 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Hdac3O88895 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.56■□□□□ 0.08
Hdac3O88895 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.56■□□□□ 0.08
Hdac3O88895 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac3O88895 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hdac3O88895 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Hdac3O88895 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Gm12441-201ENSMUST00000121806 588 ntBASIC15.55■□□□□ 0.08
Hdac3O88895 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.55■□□□□ 0.08
Hdac3O88895 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Hdac3O88895 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.55■□□□□ 0.08
Hdac3O88895 Gm2559-201ENSMUST00000201323 363 ntBASIC15.55■□□□□ 0.08
Hdac3O88895 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Hdac3O88895 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hdac3O88895 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac3O88895 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hdac3O88895 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.54■□□□□ 0.08
Hdac3O88895 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Hdac3O88895 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms