Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11aO35305 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Mir5122-201ENSMUST00000175004 89 ntBASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf11aO35305 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11aO35305 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11aO35305 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11aO35305 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11aO35305 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tnfrsf11aO35305 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11aO35305 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11aO35305 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11aO35305 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11aO35305 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11aO35305 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tnfrsf11aO35305 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Gm10252-201ENSMUST00000209541 832 ntBASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11aO35305 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms