Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Dctn1O08788 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.5■■□□□ 1.03
Dctn1O08788 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.5■■□□□ 1.03
Dctn1O08788 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dctn1O08788 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.5■■□□□ 1.03
Dctn1O08788 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dctn1O08788 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dctn1O08788 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dctn1O08788 Gm11355-201ENSMUST00000121120 306 ntBASIC21.49■■□□□ 1.03
Dctn1O08788 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Dctn1O08788 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Dctn1O08788 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dctn1O08788 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Dctn1O08788 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Dctn1O08788 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dctn1O08788 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dctn1O08788 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Dctn1O08788 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dctn1O08788 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dctn1O08788 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Dctn1O08788 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.48■■□□□ 1.03
Dctn1O08788 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Dctn1O08788 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.48■■□□□ 1.03
Dctn1O08788 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dctn1O08788 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Dctn1O08788 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Dctn1O08788 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Dctn1O08788 Gm26039-201ENSMUST00000158152 144 ntBASIC21.47■■□□□ 1.03
Dctn1O08788 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Dctn1O08788 Gm17807-201ENSMUST00000186869 298 ntBASIC21.47■■□□□ 1.03
Dctn1O08788 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Dctn1O08788 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.47■■□□□ 1.03
Dctn1O08788 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Dctn1O08788 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Dctn1O08788 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Dctn1O08788 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Dctn1O08788 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Dctn1O08788 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Dctn1O08788 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dctn1O08788 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dctn1O08788 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.46■■□□□ 1.03
Dctn1O08788 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dctn1O08788 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dctn1O08788 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Dctn1O08788 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dctn1O08788 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Dctn1O08788 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dctn1O08788 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Dctn1O08788 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Dctn1O08788 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.46■■□□□ 1.03
Dctn1O08788 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Dctn1O08788 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Dctn1O08788 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Dctn1O08788 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
Dctn1O08788 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.45■■□□□ 1.02
Dctn1O08788 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dctn1O08788 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Dctn1O08788 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.45■■□□□ 1.02
Dctn1O08788 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dctn1O08788 Idnk-204ENSMUST00000226010 1898 ntBASIC21.45■■□□□ 1.02
Dctn1O08788 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dctn1O08788 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dctn1O08788 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dctn1O08788 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Dctn1O08788 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dctn1O08788 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dctn1O08788 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Dctn1O08788 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.44■■□□□ 1.02
Dctn1O08788 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dctn1O08788 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Dctn1O08788 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dctn1O08788 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Dctn1O08788 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dctn1O08788 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Dctn1O08788 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.43■■□□□ 1.02
Dctn1O08788 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.43■■□□□ 1.02
Dctn1O08788 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.43■■□□□ 1.02
Dctn1O08788 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dctn1O08788 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms